Gene detail information of Glyur004265s00037613.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G29320.10Glycosyl transferase, family 35
NRXP_004489452.10PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Cicer arietinum]
COGNP_440871.10glycogen phosphorylase [Synechocystis sp. PCC 6803]
Swissprottr|P53536|PHSL_VICFA0Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic (Precursor)
trEMBLtr|I1LWR4|I1LWR4_SOYBN0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04265565715916-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00688PYG, glgP EC:2.4.1.1 Starch and sucrose metabolism map00500
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004645  phosphorylase activity

GO:0008184  glycogen phosphorylase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004265s00037613.1PF00343.15Phosphorylase1915039.80E-133
Glyur004265s00037613.1PF00343.15Phosphorylase5919901.50E-172


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control268.528
SRR1783600control274.919
SRR1783602moderate drought stress213.700
SRR1811619moderate drought stress212.642

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain209.733
DRR006520Root Summer glycyrrhizin high producing strain202.538
DRR006521Root Winter glycyrrhizin high producing strain33.455
DRR006522Root Winter glycyrrhizin high producing strain32.908
DRR006523Root Summer glycyrrhizin low producing strain160.439
DRR006524Root Summer glycyrrhizin low producing strain160.797
DRR006525Leaf Summer glycyrrhizin high producing strain19.779
DRR006526Leaf Summer glycyrrhizin high producing strain19.785

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.105
SRR2868004Drought Stress(Tissue:root)31.382
SRR2967015Control (Tissue:root)30.315

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.894
SRR9715740Leave6.226
SRR9715741Leave7.453
SRR9715739Root11.502
SRR9715742Root90.592
SRR9715743Root79.345

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.569
SRR8749028MeJA induced 9h19.702
SRR8749029MeJA induced 9h13.760
SRR8749030Uninduced4.008
SRR8749031Uninduced1.438
SRR8749032Uninduced2.704

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root290.049
SRR8400027Control-Root257.255

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved