Gene detail information of Glyur004270s00044169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22430.27.00E-59GroES-like zinc-binding dehydrogenase family protein
NRAFK42017.10unknown [Lotus japonicus]
COGYP_001143866.16.00E-68Zn-dependent alcohol dehydrogenase class III [Aeromonas salmonicida subsp. salmonicida A449]
Swissprottr|Q9SK87|ADHL2_ARATH1.00E-75Alcohol dehydrogenase-like 2
trEMBLtr|I3SP25|I3SP25_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK42017.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0427070119972-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00121frmA, ADH5, adhC EC:1.1.1.284 1.1.1.1 Carbon metabolism map01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004270s00044169.1PF08240.7ADH_N731531.70E-08
Glyur004270s00044169.1PF00107.21ADH_zinc_N1953109.80E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.673
SRR1783600control0.553
SRR1783602moderate drought stress0.410
SRR1811619moderate drought stress0.386

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.231
DRR006520Root Summer glycyrrhizin high producing strain0.175
DRR006521Root Winter glycyrrhizin high producing strain0.142
DRR006522Root Winter glycyrrhizin high producing strain0.550
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.444
DRR006526Leaf Summer glycyrrhizin high producing strain0.710

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.367
SRR2868004Drought Stress(Tissue:root)1.654
SRR2967015Control (Tissue:root)0.586

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.453
SRR9715740Leave2.010
SRR9715741Leave4.470
SRR9715739Root0.021
SRR9715742Root0.252
SRR9715743Root0.052

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.392
SRR8749028MeJA induced 9h16.987
SRR8749029MeJA induced 9h42.366
SRR8749030Uninduced18.471
SRR8749031Uninduced220.196
SRR8749032Uninduced93.281

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.067
SRR8400027Control-Root3.099

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved