Gene detail information of Glyur004271s00042311.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53900.21.00E-84uracil phosphoribosyltransferase
NRAFK36195.11.57E-143unknown [Lotus japonicus]
COGYP_007064883.14.00E-66uracil phosphoribosyltransferase [Calothrix sp. PCC 7507]
Swissprottr|P93394|UPP_TOBAC5.00E-113Uracil phosphoribosyltransferase
trEMBLtr|I3S7F3|I3S7F3_LOTJA6.00E-144Uncharacterized protein {ECO:0000313|EMBL:AFK36195.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04271860415584-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00761upp, UPRT EC:2.4.2.9 Pyrimidine metabolism map00240


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004271s00042311.1PF14681.1UPRTase771221.70E-08
Glyur004271s00042311.1PF14681.1UPRTase1653231.80E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.679
SRR1783600control31.922
SRR1783602moderate drought stress19.028
SRR1811619moderate drought stress18.661

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.689
DRR006520Root Summer glycyrrhizin high producing strain26.015
DRR006521Root Winter glycyrrhizin high producing strain10.620
DRR006522Root Winter glycyrrhizin high producing strain10.807
DRR006523Root Summer glycyrrhizin low producing strain22.221
DRR006524Root Summer glycyrrhizin low producing strain20.832
DRR006525Leaf Summer glycyrrhizin high producing strain31.282
DRR006526Leaf Summer glycyrrhizin high producing strain30.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.306
SRR2868004Drought Stress(Tissue:root)26.492
SRR2967015Control (Tissue:root)30.091

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.745
SRR9715740Leave55.852
SRR9715741Leave42.529
SRR9715739Root28.353
SRR9715742Root28.173
SRR9715743Root26.763

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.486
SRR8749028MeJA induced 9h17.174
SRR8749029MeJA induced 9h14.091
SRR8749030Uninduced4.106
SRR8749031Uninduced0.438
SRR8749032Uninduced3.073

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.435
SRR8400027Control-Root46.695

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved