Gene detail information of Glyur004308s00045430.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31940.14.00E-68cytochrome P450, family 82, subfamily C, polypeptide 4
NRNP_001240972.12.02E-116cytochrome P450 82A3 [Glycine max]
COGYP_004303682.11.00E-28cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O49858|C82A3_SOYBN9.00E-119Cytochrome P450 82A3
trEMBLtr|Q9FVK6|Q9FVK6_PEA4.00E-116Wound-inducible P450 hydroxylase {ECO:0000313|EMBL:AAG09208.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04308130759+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004308s00045430.1PF00067.17p45011824.50E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.367
SRR1783600control1.422
SRR1783602moderate drought stress2.471
SRR1811619moderate drought stress2.298

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.459
DRR006520Root Summer glycyrrhizin high producing strain0.569
DRR006521Root Winter glycyrrhizin high producing strain8.599
DRR006522Root Winter glycyrrhizin high producing strain9.805
DRR006523Root Summer glycyrrhizin low producing strain0.847
DRR006524Root Summer glycyrrhizin low producing strain1.631
DRR006525Leaf Summer glycyrrhizin high producing strain0.639
DRR006526Leaf Summer glycyrrhizin high producing strain0.687

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.530
SRR2868004Drought Stress(Tissue:root)53.052
SRR2967015Control (Tissue:root)20.995

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.518
SRR9715740Leave4.257
SRR9715741Leave33.229
SRR9715739Root0.844
SRR9715742Root89.336
SRR9715743Root80.656

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h66.232
SRR8749028MeJA induced 9h333.272
SRR8749029MeJA induced 9h435.611
SRR8749030Uninduced34.884
SRR8749031Uninduced132.651
SRR8749032Uninduced103.251

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.441
SRR8400027Control-Root2.600

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved