Gene detail information of Glyur004308s00045432.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31950.19.00E-55cytochrome P450, family 82, subfamily C, polypeptide 3
NRXP_004489343.15.27E-99PREDICTED: cytochrome P450 82A3-like [Cicer arietinum]
COGYP_004596270.11.00E-20Unspecific monooxygenase [Halopiger xanaduensis SH-6]
Swissprottr|O49859|C82A4_SOYBN5.00E-97Cytochrome P450 82A4
trEMBLtr|G7KJF6|G7KJF6_MEDTR9.00E-99Cytochrome P450 family protein {ECO:0000313|EMBL:AES74584.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold043081212612674-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004308s00045432.1PF00067.17p45021567.80E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.892
SRR1783600control1.980
SRR1783602moderate drought stress11.295
SRR1811619moderate drought stress12.754

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.687
DRR006520Root Summer glycyrrhizin high producing strain0.318
DRR006521Root Winter glycyrrhizin high producing strain0.230
DRR006522Root Winter glycyrrhizin high producing strain0.198
DRR006523Root Summer glycyrrhizin low producing strain1.452
DRR006524Root Summer glycyrrhizin low producing strain1.109
DRR006525Leaf Summer glycyrrhizin high producing strain0.847
DRR006526Leaf Summer glycyrrhizin high producing strain0.843

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.363
SRR2868004Drought Stress(Tissue:root)4.745
SRR2967015Control (Tissue:root)5.474

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.335
SRR9715740Leave58.591
SRR9715741Leave161.640
SRR9715739Root3.100
SRR9715742Root3.953
SRR9715743Root2.784

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.272
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.396
SRR8749031Uninduced0.058
SRR8749032Uninduced0.177

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.142
SRR8400027Control-Root3.311

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved