Gene detail information of Glyur004373s00046027.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14130.12.00E-87Peroxidase superfamily protein
NRAFK39314.13.78E-155unknown [Lotus japonicus]
Swissprottr|Q96509|PER55_ARATH2.00E-107Peroxidase 55 (Precursor)
trEMBLtr|I3SGC2|I3SGC2_LOTJA1.00E-155Uncharacterized protein {ECO:0000313|EMBL:AFK39314.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0437310793695+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004373s00046027.1PF00141.18peroxidase382546.50E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.873
SRR1783600control27.305
SRR1783602moderate drought stress18.493
SRR1811619moderate drought stress18.024

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.626
DRR006520Root Summer glycyrrhizin high producing strain2.081
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.480
DRR006524Root Summer glycyrrhizin low producing strain2.760
DRR006525Leaf Summer glycyrrhizin high producing strain3.290
DRR006526Leaf Summer glycyrrhizin high producing strain2.905

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.344
SRR2868004Drought Stress(Tissue:root)36.238
SRR2967015Control (Tissue:root)29.364

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.724
SRR9715740Leave11.218
SRR9715741Leave30.324
SRR9715739Root27.302
SRR9715742Root38.567
SRR9715743Root37.486

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.221
SRR8749028MeJA induced 9h39.730
SRR8749029MeJA induced 9h34.527
SRR8749030Uninduced177.201
SRR8749031Uninduced65.053
SRR8749032Uninduced25.937

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.812
SRR8400027Control-Root50.259

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved