Gene detail information of Glyur004374s00047610.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G52920.11.00E-11plastidic pyruvate kinase beta subunit 1
NRXP_002317739.29.22E-16hypothetical protein POPTR_0012s01140g [Populus trichocarpa]
Swissprottr|Q9FLW9|PKP2_ARATH7.00E-14Plastidial pyruvate kinase 2 (Precursor)
trEMBLtr|B9I518|B9I518_POPTR3.00E-16Pyruvate kinase {ECO:0000256|RuleBase:RU000504}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04374545652+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00873PK, pyk EC:2.7.1.40 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230
Viral carcinogenesismap05203
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0000287  magnesium ion binding

GO:0004743  pyruvate kinase activity

GO:0030955  potassium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.475
SRR1783600control14.024
SRR1783602moderate drought stress5.845
SRR1811619moderate drought stress4.340

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.710
DRR006520Root Summer glycyrrhizin high producing strain3.275
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain2.543
DRR006523Root Summer glycyrrhizin low producing strain2.966
DRR006524Root Summer glycyrrhizin low producing strain2.049
DRR006525Leaf Summer glycyrrhizin high producing strain17.744
DRR006526Leaf Summer glycyrrhizin high producing strain9.290

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.309
SRR2868004Drought Stress(Tissue:root)4.902
SRR2967015Control (Tissue:root)3.729

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.671
SRR9715740Leave5.040
SRR9715741Leave2.225
SRR9715739Root2.980
SRR9715742Root2.476
SRR9715743Root2.453

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.896
SRR8749028MeJA induced 9h3.727
SRR8749029MeJA induced 9h5.854
SRR8749030Uninduced0.424
SRR8749031Uninduced1.469
SRR8749032Uninduced1.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.127
SRR8400027Control-Root23.915

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved