Gene detail information of Glyur004400s00045879.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07250.1 | 2.00E-46 | UDP-glucosyl transferase 71C4 |
| NR | KEH37502.1 | 1.31E-78 | UDP-glucosyltransferase family protein [Medicago truncatula] |
| COG | YP_001105798.1 | 6.00E-08 | antibiotic resistance macrolide glycosyltransferase [Saccharopolyspora erythraea NRRL 2338] |
| Swissprot | tr|Q9LML6|U71C4_ARATH | 1.00E-54 | UDP-glycosyltransferase 71C4 |
| trEMBL | tr|A0A072V6Q4|A0A072V6Q4_MEDTR | 5.00E-79 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:KEH37502.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04400 | 1660 | 2055 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004400s00045879.1 | PF00201.13 | UDPGT | 3 | 72 | 1.10E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.652 |
| SRR1783600 | control | 1.555 |
| SRR1783602 | moderate drought stress | 0.634 |
| SRR1811619 | moderate drought stress | 0.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.031 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.891 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.597 |
| SRR2967015 | Control (Tissue:root) | 5.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.349 |
| SRR9715740 | Leave | 2.424 |
| SRR9715741 | Leave | 5.180 |
| SRR9715739 | Root | 13.413 |
| SRR9715742 | Root | 12.599 |
| SRR9715743 | Root | 10.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.126 |
| SRR8749028 | MeJA induced 9h | 0.085 |
| SRR8749029 | MeJA induced 9h | 0.038 |
| SRR8749030 | Uninduced | 0.143 |
| SRR8749031 | Uninduced | 0.096 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.789 |
| SRR8400027 | Control-Root | 4.888 |