Gene detail information of Glyur004487s00043065.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49160.2 | 1.00E-102 | Protein kinase superfamily protein |
| NR | XP_006598894.1 | 1.17E-144 | PREDICTED: probable serine/threonine-protein kinase WNK4-like isoform X2 [Glycine max] |
| COG | YP_003797667.1 | 2.00E-19 | putative serine/threonine protein kinase [Candidatus Nitrospira defluvii] |
| Swissprot | tr|Q6EU49|WNK4_ORYSJ | 4.00E-125 | Probable serine/threonine-protein kinase WNK4 |
| trEMBL | tr|K7MES9|K7MES9_SOYBN | 4.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02531.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04487 | 10322 | 11453 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.1.5.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004487s00043065.1 | PF00069.20 | Pkinase | 4 | 216 | 7.90E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.103 |
| SRR1783600 | control | 0.075 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.074 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.074 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.316 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.173 |
| SRR2967015 | Control (Tissue:root) | 0.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.083 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.202 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.046 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.060 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.179 |
| SRR8400027 | Control-Root | 0.204 |