Gene detail information of Glyur004509s00042608.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06060.17.00E-96NAD(P)-binding Rossmann-fold superfamily protein
NRXP_004503172.11.14E-172PREDICTED: tropinone reductase homolog At1g07440-like [Cicer arietinum]
COGYP_007318338.16.00E-81dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Chamaesiphon minutus PCC 6605]
Swissprottr|Q9ASX2|TRNH1_ARATH1.00E-117Tropinone reductase homolog At1g07440
trEMBLtr|A0A072UY64|A0A072UY64_MEDTR2.00E-171NAD(P)-binding rossmann-fold protein {ECO:0000313|EMBL:KEH34749.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold04509932312018+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08081TR1 EC:1.1.1.206 Tropane, piperidine and pyridine alkaloid biosynthesis map00960


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004509s00042608.1PF00106.20adh_short201861.30E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.530
SRR1783600control12.744
SRR1783602moderate drought stress9.807
SRR1811619moderate drought stress9.778

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.552
DRR006520Root Summer glycyrrhizin high producing strain11.127
DRR006521Root Winter glycyrrhizin high producing strain1.966
DRR006522Root Winter glycyrrhizin high producing strain1.923
DRR006523Root Summer glycyrrhizin low producing strain10.534
DRR006524Root Summer glycyrrhizin low producing strain10.069
DRR006525Leaf Summer glycyrrhizin high producing strain18.936
DRR006526Leaf Summer glycyrrhizin high producing strain18.598

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.855
SRR2868004Drought Stress(Tissue:root)37.086
SRR2967015Control (Tissue:root)23.923

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.561
SRR9715740Leave20.283
SRR9715741Leave14.794
SRR9715739Root15.778
SRR9715742Root10.470
SRR9715743Root12.387

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.143
SRR8749028MeJA induced 9h16.236
SRR8749029MeJA induced 9h15.611
SRR8749030Uninduced4.021
SRR8749031Uninduced0.727
SRR8749032Uninduced1.427

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.987
SRR8400027Control-Root27.095

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved