Gene detail information of Glyur004549s00044044.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29450.1 | 1.00E-35 | Leucine-rich repeat protein kinase family protein |
| NR | XP_004502558.1 | 5.05E-81 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|O64556|Y2923_ARATH | 7.00E-39 | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 (Precursor) |
| trEMBL | tr|A0A072UC80|A0A072UC80_MEDTR | 2.00E-73 | LRR receptor-like kinase plant {ECO:0000313|EMBL:KEH27247.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04549 | 927 | 4233 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.8.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004549s00044044.1 | PF07714.12 | Pkinase_Tyr | 203 | 295 | 1.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.087 |
| SRR1783600 | control | 0.088 |
| SRR1783602 | moderate drought stress | 0.346 |
| SRR1811619 | moderate drought stress | 0.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.082 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.145 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.245 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.299 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.254 |
| SRR2967015 | Control (Tissue:root) | 0.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.107 |
| SRR9715743 | Root | 0.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.120 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.105 |
| SRR8400027 | Control-Root | 0.167 |