Gene detail information of Glyur004587s00042678.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63700.1 | 3.00E-21 | Protein kinase superfamily protein |
| NR | XP_010662702.1 | 2.37E-25 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Vitis vinifera] |
| Swissprot | tr|Q9CAD5|YODA_ARATH | 5.00E-24 | Mitogen-activated protein kinase kinase kinase YODA |
| trEMBL | tr|A5BG79|A5BG79_VITVI | 9.00E-26 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN65619.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04587 | 546 | 1093 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.1.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K20717 | YDA | EC:2.7.11.25 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004587s00042678.1 | PF00069.20 | Pkinase | 11 | 73 | 1.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.133 |
| SRR8749028 | MeJA induced 9h | 7.758 |
| SRR8749029 | MeJA induced 9h | 10.058 |
| SRR8749030 | Uninduced | 1.386 |
| SRR8749031 | Uninduced | 0.858 |
| SRR8749032 | Uninduced | 1.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |