Gene detail information of Glyur004637s00043297.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02780.2 | 3.00E-59 | glutathione transferase lambda 1 |
| NR | XP_004493928.1 | 4.87E-101 | PREDICTED: glutathione S-transferase L3-like isoform X1 [Cicer arietinum] |
| COG | YP_007172684.1 | 1.00E-12 | glutathione S-transferase [Dactylococcopsis salina PCC 8305] |
| Swissprot | tr|Q6NLB0|GSTL1_ARATH | 9.00E-76 | Glutathione S-transferase L1 |
| trEMBL | tr|I1NA39|I1NA39_SOYBN | 8.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04637 | 156 | 1904 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004637s00043297.1 | PF13417.1 | GST_N_3 | 58 | 135 | 1.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.789 |
| SRR1783600 | control | 15.827 |
| SRR1783602 | moderate drought stress | 27.297 |
| SRR1811619 | moderate drought stress | 28.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 37.553 |
| SRR2868004 | Drought Stress(Tissue:root) | 94.815 |
| SRR2967015 | Control (Tissue:root) | 61.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.090 |
| SRR9715740 | Leave | 0.103 |
| SRR9715741 | Leave | 2.233 |
| SRR9715739 | Root | 6.635 |
| SRR9715742 | Root | 14.091 |
| SRR9715743 | Root | 15.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 89.538 |
| SRR8749028 | MeJA induced 9h | 208.302 |
| SRR8749029 | MeJA induced 9h | 152.159 |
| SRR8749030 | Uninduced | 381.259 |
| SRR8749031 | Uninduced | 491.389 |
| SRR8749032 | Uninduced | 214.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 136.031 |
| SRR8400027 | Control-Root | 107.206 |