Gene detail information of Glyur004695s00039093.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32730.2 | 4.00E-118 | Homeodomain-like protein |
| NR | XP_003527826.1 | 0 | PREDICTED: myb-related protein 3R-1-like [Glycine max] |
| Swissprot | tr|Q9S7G7|MB3R1_ARATH | 0 | Myb-related protein 3R-1 |
| trEMBL | tr|I1K997|I1K997_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04695 | 1472 | 6917 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004695s00039093.1 | PF00249.26 | Myb_DNA-binding | 37 | 83 | 8.00E-16 |
| Glyur004695s00039093.1 | PF00249.26 | Myb_DNA-binding | 89 | 135 | 1.40E-18 |
| Glyur004695s00039093.1 | PF00249.26 | Myb_DNA-binding | 141 | 183 | 5.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.025 |
| SRR1783600 | control | 2.044 |
| SRR1783602 | moderate drought stress | 1.341 |
| SRR1811619 | moderate drought stress | 1.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.455 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.740 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.813 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.769 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.882 |
| SRR2967015 | Control (Tissue:root) | 5.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.818 |
| SRR9715740 | Leave | 0.247 |
| SRR9715741 | Leave | 0.647 |
| SRR9715739 | Root | 0.321 |
| SRR9715742 | Root | 1.153 |
| SRR9715743 | Root | 1.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.000 |
| SRR8749028 | MeJA induced 9h | 6.446 |
| SRR8749029 | MeJA induced 9h | 5.170 |
| SRR8749030 | Uninduced | 0.388 |
| SRR8749031 | Uninduced | 1.139 |
| SRR8749032 | Uninduced | 0.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.582 |
| SRR8400027 | Control-Root | 6.114 |