Gene detail information of Glyur004762s00047508.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30960.10SOS3-interacting protein 3
NRXP_007138415.10hypothetical protein PHAVU_009G206900g [Phaseolus vulgaris]
COGYP_007468874.16.00E-37serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|O65554|CIPK6_ARATH0CBL-interacting serine/threonine-protein kinase 6
trEMBLtr|V7AXV8|V7AXV8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10409.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0476281729476+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004762s00047508.1PF00069.20Pkinase192738.00E-74
Glyur004762s00047508.1PF03822.9NAF2993603.40E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control87.422
SRR1783600control88.637
SRR1783602moderate drought stress61.225
SRR1811619moderate drought stress61.282

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain399.532
DRR006520Root Summer glycyrrhizin high producing strain396.323
DRR006521Root Winter glycyrrhizin high producing strain12.589
DRR006522Root Winter glycyrrhizin high producing strain15.618
DRR006523Root Summer glycyrrhizin low producing strain393.612
DRR006524Root Summer glycyrrhizin low producing strain337.495
DRR006525Leaf Summer glycyrrhizin high producing strain439.686
DRR006526Leaf Summer glycyrrhizin high producing strain498.216

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)84.801
SRR2868004Drought Stress(Tissue:root)174.054
SRR2967015Control (Tissue:root)149.264

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave294.994
SRR9715740Leave328.816
SRR9715741Leave272.268
SRR9715739Root114.635
SRR9715742Root169.567
SRR9715743Root163.515

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.293
SRR8749028MeJA induced 9h52.196
SRR8749029MeJA induced 9h16.449
SRR8749030Uninduced165.862
SRR8749031Uninduced23.272
SRR8749032Uninduced22.843

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root138.401
SRR8400027Control-Root172.822

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved