Gene detail information of Glyur004778s00044589.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36220.1 | 2.00E-64 | ferulic acid 5-hydroxylase 1 |
| NR | XP_004512940.1 | 1.93E-149 | PREDICTED: cytochrome P450 71A1-like [Cicer arietinum] |
| COG | YP_004862454.1 | 8.00E-27 | Cytochrome P450 [Candidatus Chloracidobacterium thermophilum B] |
| Swissprot | tr|H2DH18|C7A12_PANGI | 1.00E-109 | Cytochrome P450 CYP736A12 |
| trEMBL | tr|I1K5S8|I1K5S8_SOYBN | 2.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04778 | 79 | 912 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP84A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004778s00044589.1 | PF00067.17 | p450 | 3 | 262 | 3.80E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.606 |
| SRR1783600 | control | 1.778 |
| SRR1783602 | moderate drought stress | 2.175 |
| SRR1811619 | moderate drought stress | 1.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.692 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.258 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.191 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.796 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.739 |
| SRR2868004 | Drought Stress(Tissue:root) | 44.327 |
| SRR2967015 | Control (Tissue:root) | 48.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 1.291 |
| SRR9715742 | Root | 1.277 |
| SRR9715743 | Root | 1.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.171 |
| SRR8749028 | MeJA induced 9h | 0.492 |
| SRR8749029 | MeJA induced 9h | 0.073 |
| SRR8749030 | Uninduced | 0.248 |
| SRR8749031 | Uninduced | 0.872 |
| SRR8749032 | Uninduced | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.509 |
| SRR8400027 | Control-Root | 8.015 |