Gene detail information of Glyur004814s00042707.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 2.00E-89 | FAR1-related sequence 5 |
| NR | XP_006603498.1 | 5.34E-168 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 2.00E-98 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|K7LR01|K7LR01_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G29330.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04814 | 4880 | 7562 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004814s00042707.1 | PF03101.10 | FAR1 | 105 | 193 | 4.20E-16 |
| Glyur004814s00042707.1 | PF10551.4 | MULE | 319 | 409 | 3.30E-30 |
| Glyur004814s00042707.1 | PF04434.12 | SWIM | 604 | 626 | 0.00018 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.053 |
| SRR1811619 | moderate drought stress | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.043 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.019 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.068 |
| SRR9715740 | Leave | 0.142 |
| SRR9715741 | Leave | 0.027 |
| SRR9715739 | Root | 0.011 |
| SRR9715742 | Root | 0.064 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.166 |
| SRR8400027 | Control-Root | 0.297 |