Gene detail information of Glyur004823s00043161.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.11.00E-174alcohol dehydrogenase 1
NRXP_003602129.10Alcohol dehydrogenase [Medicago truncatula]
COGYP_003147226.11.00E-130S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
Swissprottr|P12886|ADH1_PEA0Alcohol dehydrogenase 1
trEMBLtr|G7J5M6|G7J5M6_MEDTR0Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AES72380.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0482359129343-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur004823s00043161.1PF08240.7ADH_N121392.10E-24
Glyur004823s00043161.1PF00107.21ADH_zinc_N1933184.70E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control113.672
SRR1783600control114.468
SRR1783602moderate drought stress51.884
SRR1811619moderate drought stress53.971

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain172.496
DRR006520Root Summer glycyrrhizin high producing strain167.563
DRR006521Root Winter glycyrrhizin high producing strain2444.547
DRR006522Root Winter glycyrrhizin high producing strain2404.253
DRR006523Root Summer glycyrrhizin low producing strain175.431
DRR006524Root Summer glycyrrhizin low producing strain171.711
DRR006525Leaf Summer glycyrrhizin high producing strain20.393
DRR006526Leaf Summer glycyrrhizin high producing strain22.692

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.752
SRR2868004Drought Stress(Tissue:root)64.811
SRR2967015Control (Tissue:root)68.639

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.935
SRR9715740Leave12.410
SRR9715741Leave20.244
SRR9715739Root190.585
SRR9715742Root168.904
SRR9715743Root171.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h577.203
SRR8749028MeJA induced 9h1262.339
SRR8749029MeJA induced 9h1422.525
SRR8749030Uninduced799.113
SRR8749031Uninduced1064.917
SRR8749032Uninduced1790.565

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root303.623
SRR8400027Control-Root296.114

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved