Gene detail information of Glyur004824s00047415.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04824 | 11489 | 11791 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01723 | AOS | EC:4.2.1.92 | alpha-Linolenic acid metabolism | map00592 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.072 |
| SRR1783600 | control | 1.110 |
| SRR1783602 | moderate drought stress | 1.070 |
| SRR1811619 | moderate drought stress | 1.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.716 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.438 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.737 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.719 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.365 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.318 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.924 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.090 |
| SRR2967015 | Control (Tissue:root) | 2.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.658 |
| SRR8749028 | MeJA induced 9h | 0.914 |
| SRR8749029 | MeJA induced 9h | 0.620 |
| SRR8749030 | Uninduced | 0.210 |
| SRR8749031 | Uninduced | 0.015 |
| SRR8749032 | Uninduced | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |