Gene detail information of Glyur004859s00040110.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH28584.1 | 2.07E-65 | Ulp1 protease family, carboxy-terminal domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072UFQ5|A0A072UFQ5_MEDTR | 8.00E-66 | Ulp1 protease family, carboxy-terminal domain protein {ECO:0000313|EMBL:KEH28584.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04859 | 3480 | 5596 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | ULP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004859s00040110.1 | PF02902.14 | Peptidase_C48 | 140 | 291 | 3.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.008 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 0.038 |
| SRR1811619 | moderate drought stress | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.129 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.236 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.224 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.415 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.013 |
| SRR2967015 | Control (Tissue:root) | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.145 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 1.145 |
| SRR8749031 | Uninduced | 0.237 |
| SRR8749032 | Uninduced | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.007 |
| SRR8400027 | Control-Root | 0.005 |