Gene detail information of Glyur004967s00044730.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G49820.11.00E-71S-methyl-5-thioribose kinase
NRXP_007143064.11.02E-103hypothetical protein PHAVU_007G040800g [Phaseolus vulgaris]
COGYP_007513008.12.00E-45putative S-methyl-5-thioribose kinase [Bradyrhizobium oligotrophicum S58]
Swissprottr|Q9C6D2|MTK_ARATH4.00E-87Methylthioribose kinase
trEMBLtr|V7BDR2|V7BDR2_PHAVU4.00E-104Uncharacterized protein {ECO:0000313|EMBL:ESW15058.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold049671101911609+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00899mtnK EC:2.7.1.100 Cysteine and methionine metabolism map00270


Gene Ontology

molecular_function

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.180
SRR1783600control2.258
SRR1783602moderate drought stress2.566
SRR1811619moderate drought stress3.087

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.370
DRR006520Root Summer glycyrrhizin high producing strain2.032
DRR006521Root Winter glycyrrhizin high producing strain1.507
DRR006522Root Winter glycyrrhizin high producing strain0.720
DRR006523Root Summer glycyrrhizin low producing strain0.218
DRR006524Root Summer glycyrrhizin low producing strain0.496
DRR006525Leaf Summer glycyrrhizin high producing strain6.146
DRR006526Leaf Summer glycyrrhizin high producing strain4.993

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.709
SRR2868004Drought Stress(Tissue:root)1.423
SRR2967015Control (Tissue:root)1.260

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.370
SRR9715740Leave4.561
SRR9715741Leave5.692
SRR9715739Root1.223
SRR9715742Root1.649
SRR9715743Root1.898

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.209
SRR8749028MeJA induced 9h0.265
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.784
SRR8749031Uninduced0.153
SRR8749032Uninduced0.028

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.937
SRR8400027Control-Root3.005

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved