Gene detail information of Glyur005070s00047292.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45580.16.00E-49cytochrome P450, family 76, subfamily C, polypeptide 3
NRXP_004505593.18.08E-129PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
Swissprottr|Q8VWZ7|C76B6_CATRO1.00E-86Geraniol 8-hydroxylase
trEMBLtr|G7JST5|G7JST5_MEDTR2.00E-122Cytochrome P450 family protein {ECO:0000313|EMBL:AES89642.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0507014712361-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005070s00047292.1PF00067.17p450342949.10E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.847
SRR1783600control11.882
SRR1783602moderate drought stress2.597
SRR1811619moderate drought stress2.456

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.870
DRR006520Root Summer glycyrrhizin high producing strain4.413
DRR006521Root Winter glycyrrhizin high producing strain1.634
DRR006522Root Winter glycyrrhizin high producing strain1.380
DRR006523Root Summer glycyrrhizin low producing strain2.151
DRR006524Root Summer glycyrrhizin low producing strain2.133
DRR006525Leaf Summer glycyrrhizin high producing strain0.290
DRR006526Leaf Summer glycyrrhizin high producing strain0.297

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.440
SRR2868004Drought Stress(Tissue:root)20.792
SRR2967015Control (Tissue:root)15.819

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.125
SRR9715740Leave1.853
SRR9715741Leave3.167
SRR9715739Root2.936
SRR9715742Root5.391
SRR9715743Root5.562

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.505
SRR8749028MeJA induced 9h43.603
SRR8749029MeJA induced 9h32.659
SRR8749030Uninduced41.266
SRR8749031Uninduced29.866
SRR8749032Uninduced28.375

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.438
SRR8400027Control-Root4.212

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved