Gene detail information of Glyur005079s00043481.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04120.11.00E-40glyceraldehyde-3-phosphate dehydrogenase C subunit 1
NRBAP05446.18.59E-56glyceraldehyde 3-phosphate dehydrogenase, partial [Ulmus davidiana var. japonica]
COGNP_416293.12.00E-43glyceraldehyde-3-phosphate dehydrogenase A [Escherichia coli str. K-12 substr. MG1655]
Swissprottr|P34921|G3PC_DIACA1.00E-54Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
trEMBLtr|A0A068PC16|A0A068PC16_9ROSA3.00E-56Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:BAP05446.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold05079108906+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00134GAPDH, gapA EC:1.2.1.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066
Alzheimer's diseasemap05010


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005079s00043481.1PF02800.15Gp_dh_C231233.50E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.925
SRR1783600control14.894
SRR1783602moderate drought stress15.682
SRR1811619moderate drought stress15.804

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.454
DRR006520Root Summer glycyrrhizin high producing strain5.373
DRR006521Root Winter glycyrrhizin high producing strain3.018
DRR006522Root Winter glycyrrhizin high producing strain2.045
DRR006523Root Summer glycyrrhizin low producing strain5.417
DRR006524Root Summer glycyrrhizin low producing strain3.867
DRR006525Leaf Summer glycyrrhizin high producing strain1.193
DRR006526Leaf Summer glycyrrhizin high producing strain1.854

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.263
SRR2868004Drought Stress(Tissue:root)0.530
SRR2967015Control (Tissue:root)0.123

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.056
SRR9715740Leave0.157
SRR9715741Leave0.148
SRR9715739Root0.064
SRR9715742Root0.056
SRR9715743Root0.700

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.030

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.141
SRR8400027Control-Root0.036

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved