Gene detail information of Glyur005111s00043798.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04120.12.00E-77glyceraldehyde-3-phosphate dehydrogenase C subunit 1
NRACJ83968.11.67E-97unknown [Medicago truncatula]
COGNP_416293.11.00E-81glyceraldehyde-3-phosphate dehydrogenase A [Escherichia coli str. K-12 substr. MG1655]
Swissprottr|P17878|G3PC_MESCR4.00E-98Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
trEMBLtr|B7FGT9|B7FGT9_MEDTR6.00E-98Uncharacterized protein {ECO:0000313|EMBL:AFK33402.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0511131957009-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00134GAPDH, gapA EC:1.2.1.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066
Alzheimer's diseasemap05010


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005111s00043798.1PF02800.15Gp_dh_C181496.00E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control203.914
SRR1783600control206.844
SRR1783602moderate drought stress146.940
SRR1811619moderate drought stress150.957

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain372.202
DRR006520Root Summer glycyrrhizin high producing strain374.129
DRR006521Root Winter glycyrrhizin high producing strain223.881
DRR006522Root Winter glycyrrhizin high producing strain221.857
DRR006523Root Summer glycyrrhizin low producing strain232.643
DRR006524Root Summer glycyrrhizin low producing strain244.559
DRR006525Leaf Summer glycyrrhizin high producing strain93.926
DRR006526Leaf Summer glycyrrhizin high producing strain93.406

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)183.059
SRR2868004Drought Stress(Tissue:root)144.719
SRR2967015Control (Tissue:root)132.474

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave307.732
SRR9715740Leave295.574
SRR9715741Leave307.444
SRR9715739Root847.728
SRR9715742Root475.171
SRR9715743Root576.847

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h262.751
SRR8749028MeJA induced 9h136.076
SRR8749029MeJA induced 9h184.765
SRR8749030Uninduced82.763
SRR8749031Uninduced50.442
SRR8749032Uninduced48.680

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root429.153
SRR8400027Control-Root538.794

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved