Gene detail information of Glyur005119s00045340.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58380.13.00E-162SOS3-interacting protein 1
NRXP_003517006.10PREDICTED: CBL-interacting protein kinase 2-like [Glycine max]
COGYP_007468874.12.00E-36serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q7X996|CIPK2_ORYSJ0CBL-interacting protein kinase 2
trEMBLtr|I1J7N3|I1J7N3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G32400.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0511948536554+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005119s00045340.1PF00069.20Pkinase663207.60E-77
Glyur005119s00045340.1PF03822.9NAF3634202.40E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.840
SRR1783600control25.209
SRR1783602moderate drought stress29.615
SRR1811619moderate drought stress29.638

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain95.531
DRR006520Root Summer glycyrrhizin high producing strain94.251
DRR006521Root Winter glycyrrhizin high producing strain66.570
DRR006522Root Winter glycyrrhizin high producing strain64.649
DRR006523Root Summer glycyrrhizin low producing strain198.078
DRR006524Root Summer glycyrrhizin low producing strain199.924
DRR006525Leaf Summer glycyrrhizin high producing strain22.019
DRR006526Leaf Summer glycyrrhizin high producing strain21.447

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.708
SRR2868004Drought Stress(Tissue:root)22.831
SRR2967015Control (Tissue:root)18.424

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.945
SRR9715740Leave41.382
SRR9715741Leave34.108
SRR9715739Root18.689
SRR9715742Root90.153
SRR9715743Root76.538

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.244
SRR8749028MeJA induced 9h36.257
SRR8749029MeJA induced 9h43.908
SRR8749030Uninduced15.564
SRR8749031Uninduced8.146
SRR8749032Uninduced14.349

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.001
SRR8400027Control-Root43.239

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved