Gene detail information of Glyur005194s00034334.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27680.11.00E-159ADPGLC-PPase large subunit
NRXP_003553688.20PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like [Glycine max]
COGYP_007148346.13.00E-146glucose-1-phosphate adenylyltransferase [Cylindrospermum stagnale PCC 7417]
Swissprottr|P55230|GLGL2_ARATH0Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic (Precursor)
trEMBLtr|I1NBK6|I1NBK6_SOYBN0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold051946286908+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005194s00034334.3PF00483.18NTP_transferase192075.00E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.855
SRR1783600control7.732
SRR1783602moderate drought stress5.464
SRR1811619moderate drought stress5.363

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.086
DRR006520Root Summer glycyrrhizin high producing strain3.063
DRR006521Root Winter glycyrrhizin high producing strain2.750
DRR006522Root Winter glycyrrhizin high producing strain2.503
DRR006523Root Summer glycyrrhizin low producing strain3.299
DRR006524Root Summer glycyrrhizin low producing strain3.461
DRR006525Leaf Summer glycyrrhizin high producing strain10.768
DRR006526Leaf Summer glycyrrhizin high producing strain11.879

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.093
SRR2868004Drought Stress(Tissue:root)2.242
SRR2967015Control (Tissue:root)1.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.498
SRR9715740Leave13.886
SRR9715741Leave3.197
SRR9715739Root0.019
SRR9715742Root0.293
SRR9715743Root0.243

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.114
SRR8749028MeJA induced 9h0.316
SRR8749029MeJA induced 9h0.053
SRR8749030Uninduced0.341
SRR8749031Uninduced0.000
SRR8749032Uninduced0.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.631
SRR8400027Control-Root3.498

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved