Gene detail information of Glyur005197s00044918.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.13.00E-148Leucine-rich repeat receptor-like protein kinase family protein
NRKEH19363.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004775215.19.00E-62RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|A0A072TRC9|A0A072TRC9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH19363.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0519724265723+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005197s00044918.1PF13855.1LRR_81321924.10E-09
Glyur005197s00044918.1PF00560.28LRR_12062270.87
Glyur005197s00044918.1PF00560.28LRR_12292510.94
Glyur005197s00044918.1PF00560.28LRR_12532750.38
Glyur005197s00044918.1PF00560.28LRR_13013230.49
Glyur005197s00044918.1PF00560.28LRR_13493710.49
Glyur005197s00044918.1PF00560.28LRR_13974191.1
Glyur005197s00044918.1PF13855.1LRR_84204802.70E-08
Glyur005197s00044918.1PF00560.28LRR_14935150.03
Glyur005197s00044918.1PF13516.1LRR_65655780.92
Glyur005197s00044918.1PF00069.20Pkinase7219706.90E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.446
SRR1783600control0.440
SRR1783602moderate drought stress0.185
SRR1811619moderate drought stress0.219

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.515
DRR006520Root Summer glycyrrhizin high producing strain0.448
DRR006521Root Winter glycyrrhizin high producing strain0.143
DRR006522Root Winter glycyrrhizin high producing strain0.174
DRR006523Root Summer glycyrrhizin low producing strain0.253
DRR006524Root Summer glycyrrhizin low producing strain0.195
DRR006525Leaf Summer glycyrrhizin high producing strain3.726
DRR006526Leaf Summer glycyrrhizin high producing strain3.887

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.295
SRR2868004Drought Stress(Tissue:root)3.550
SRR2967015Control (Tissue:root)4.254

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.550
SRR9715740Leave5.905
SRR9715741Leave6.491
SRR9715739Root3.626
SRR9715742Root12.224
SRR9715743Root9.989

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.022
SRR8749028MeJA induced 9h0.100
SRR8749029MeJA induced 9h0.010
SRR8749030Uninduced0.021
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.012
SRR8400027Control-Root3.432

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved