Gene detail information of Glyur005332s00040069.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G35530.11.00E-120basic region/leucine zipper transcription factor 16
NRKEH20260.10bZIP transcription factor family protein [Medicago truncatula]
Swissprottr|P23922|HBP1A_WHEAT1.00E-69Transcription factor HBP-1a
trEMBLtr|A0A072U370|A0A072U370_MEDTR0BZIP transcription factor family protein {ECO:0000313|EMBL:KEH20260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0533236304-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005332s00040069.2PF07777.6MFMR11975.70E-67
Glyur005332s00040069.2PF00170.16bZIP_13083709.10E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.403
SRR1783600control14.582
SRR1783602moderate drought stress13.862
SRR1811619moderate drought stress15.933

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.714
DRR006520Root Summer glycyrrhizin high producing strain21.974
DRR006521Root Winter glycyrrhizin high producing strain25.433
DRR006522Root Winter glycyrrhizin high producing strain25.337
DRR006523Root Summer glycyrrhizin low producing strain18.093
DRR006524Root Summer glycyrrhizin low producing strain17.234
DRR006525Leaf Summer glycyrrhizin high producing strain20.193
DRR006526Leaf Summer glycyrrhizin high producing strain18.641

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.986
SRR2868004Drought Stress(Tissue:root)25.870
SRR2967015Control (Tissue:root)24.551

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.452
SRR9715740Leave22.372
SRR9715741Leave22.648
SRR9715739Root7.294
SRR9715742Root15.763
SRR9715743Root13.278

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.033
SRR8749028MeJA induced 9h21.002
SRR8749029MeJA induced 9h12.896
SRR8749030Uninduced18.267
SRR8749031Uninduced12.617
SRR8749032Uninduced14.720

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.787
SRR8400027Control-Root15.104

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved