Gene detail information of Glyur005380s00043998.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22400.1 | 3.00E-105 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003615138.1 | 2.70E-162 | Cytokinin-O-glucosyltransferase [Medicago truncatula] |
| COG | YP_004958904.1 | 3.00E-07 | MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|F8WKW1|UGT2_GARJA | 2.00E-139 | 7-deoxyloganetin glucosyltransferase |
| trEMBL | tr|G7KBB5|G7KBB5_MEDTR | 1.00E-162 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:AES98096.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05380 | 3409 | 9323 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005380s00043998.1 | PF00201.13 | UDPGT | 174 | 402 | 4.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.245 |
| SRR1783600 | control | 0.222 |
| SRR1783602 | moderate drought stress | 0.349 |
| SRR1811619 | moderate drought stress | 0.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.702 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.453 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.457 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.094 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.008 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.158 |
| SRR2967015 | Control (Tissue:root) | 3.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.463 |
| SRR9715740 | Leave | 0.062 |
| SRR9715741 | Leave | 0.551 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.018 |
| SRR9715743 | Root | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 289.524 |
| SRR8749028 | MeJA induced 9h | 453.709 |
| SRR8749029 | MeJA induced 9h | 415.129 |
| SRR8749030 | Uninduced | 546.314 |
| SRR8749031 | Uninduced | 565.978 |
| SRR8749032 | Uninduced | 283.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.512 |
| SRR8400027 | Control-Root | 0.469 |