Gene detail information of Glyur005436s00044001.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22590.1 | 1.00E-71 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003593144.1 | 0 | Glucosyltransferase [Medicago truncatula] |
| Swissprot | tr|D4Q9Z5|SGT3_SOYBN | 0 | Soyasaponin III rhamnosyltransferase |
| trEMBL | tr|G7ILA7|G7ILA7_MEDTR | 0 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:AES63395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05436 | 291 | 1715 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005436s00044001.1 | PF00201.13 | UDPGT | 179 | 377 | 1.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 245.433 |
| SRR1783600 | control | 242.553 |
| SRR1783602 | moderate drought stress | 92.698 |
| SRR1811619 | moderate drought stress | 91.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 246.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 247.009 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.631 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.438 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.213 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.573 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 696.457 |
| SRR2868004 | Drought Stress(Tissue:root) | 341.159 |
| SRR2967015 | Control (Tissue:root) | 337.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.036 |
| SRR9715740 | Leave | 5.292 |
| SRR9715741 | Leave | 4.483 |
| SRR9715739 | Root | 342.072 |
| SRR9715742 | Root | 393.225 |
| SRR9715743 | Root | 376.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.111 |
| SRR8749028 | MeJA induced 9h | 3.014 |
| SRR8749029 | MeJA induced 9h | 2.966 |
| SRR8749030 | Uninduced | 5.210 |
| SRR8749031 | Uninduced | 0.654 |
| SRR8749032 | Uninduced | 11.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 320.625 |
| SRR8400027 | Control-Root | 391.252 |