Gene detail information of Glyur005483s00046855.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18280.2 | 1.00E-20 | apyrase 2 |
| NR | BAM84273.1 | 2.44E-34 | apyrase [Medicago truncatula] |
| Swissprot | tr|P52914|NTPA_PEA | 1.00E-26 | Nucleoside-triphosphatase |
| trEMBL | tr|M1VNS8|M1VNS8_MEDTR | 9.00E-35 | Apyrase {ECO:0000313|EMBL:BAM84273.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05483 | 3098 | 3709 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K14641 | APY1_2 | EC:3.6.1.5 | Purine metabolism | map00230 |
| Pyrimidine metabolism | map00240 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005483s00046855.1 | PF01150.12 | GDA1_CD39 | 3 | 79 | 6.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.042 |
| SRR1783600 | control | 3.902 |
| SRR1783602 | moderate drought stress | 6.387 |
| SRR1811619 | moderate drought stress | 6.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.207 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.149 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.254 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 43.935 |
| SRR2868004 | Drought Stress(Tissue:root) | 32.704 |
| SRR2967015 | Control (Tissue:root) | 33.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 130.734 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 40.873 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.383 |
| SRR8400027 | Control-Root | 3.143 |