Gene detail information of Glyur005489s00046443.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.10Leucine-rich repeat protein kinase family protein
NRXP_004512441.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum]
COGYP_001192956.13.00E-50two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7JB64|G7JB64_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES71116.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0548952188604-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005489s00046443.1PF08263.7LRRNT_21041433.60E-12
Glyur005489s00046443.1PF00560.28LRR_12412631
Glyur005489s00046443.1PF13855.1LRR_82893492.60E-06
Glyur005489s00046443.1PF00560.28LRR_14905100.92
Glyur005489s00046443.1PF00560.28LRR_15365570.01
Glyur005489s00046443.1PF13855.1LRR_85636196.20E-07
Glyur005489s00046443.1PF00560.28LRR_16346540.022
Glyur005489s00046443.1PF00069.20Pkinase7739947.70E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.239
SRR1783600control0.264
SRR1783602moderate drought stress0.671
SRR1811619moderate drought stress0.591

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.160
DRR006520Root Summer glycyrrhizin high producing strain0.150
DRR006521Root Winter glycyrrhizin high producing strain0.046
DRR006522Root Winter glycyrrhizin high producing strain0.141
DRR006523Root Summer glycyrrhizin low producing strain0.293
DRR006524Root Summer glycyrrhizin low producing strain0.340
DRR006525Leaf Summer glycyrrhizin high producing strain0.086
DRR006526Leaf Summer glycyrrhizin high producing strain0.123

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.606
SRR2868004Drought Stress(Tissue:root)0.820
SRR2967015Control (Tissue:root)0.616

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.082
SRR9715740Leave0.582
SRR9715741Leave0.010
SRR9715739Root0.046
SRR9715742Root0.029
SRR9715743Root0.019

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.252
SRR8749028MeJA induced 9h0.496
SRR8749029MeJA induced 9h0.184
SRR8749030Uninduced0.837
SRR8749031Uninduced5.401
SRR8749032Uninduced3.689

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.072
SRR8400027Control-Root0.126

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved