Gene detail information of Glyur005494s00046723.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38620.1 | 4.00E-55 | myb domain protein 4 |
| NR | NP_001235820.1 | 7.44E-129 | MYB transcription factor MYB185 [Glycine max] |
| Swissprot | tr|P81393|MYB08_ANTMA | 1.00E-68 | Myb-related protein 308 |
| trEMBL | tr|Q0PJK2|Q0PJK2_SOYBN | 3.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05494 | 6231 | 7989 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005494s00046723.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 1.30E-13 |
| Glyur005494s00046723.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 1.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.401 |
| SRR1783600 | control | 53.208 |
| SRR1783602 | moderate drought stress | 55.201 |
| SRR1811619 | moderate drought stress | 55.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.307 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.308 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.460 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 21.257 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.412 |
| SRR2967015 | Control (Tissue:root) | 27.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 46.276 |
| SRR9715740 | Leave | 10.442 |
| SRR9715741 | Leave | 12.110 |
| SRR9715739 | Root | 11.255 |
| SRR9715742 | Root | 19.804 |
| SRR9715743 | Root | 16.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.435 |
| SRR8749029 | MeJA induced 9h | 0.056 |
| SRR8749030 | Uninduced | 0.948 |
| SRR8749031 | Uninduced | 0.071 |
| SRR8749032 | Uninduced | 0.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 84.390 |
| SRR8400027 | Control-Root | 55.259 |