Gene detail information of Glyur005500s00044533.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31810.31.00E-84ACT domain-containing small subunit of acetolactate synthase protein
NRXP_003629945.11.57E-132Acetolactate synthase small subunit [Medicago truncatula]
COGNP_924082.16.00E-48acetolactate synthase 3 regulatory subunit [Gloeobacter violaceus PCC 7421]
Swissprottr|Q9SMC2|ILVH_NICPL3.00E-110Acetolactate synthase small subunit 1, chloroplastic (Precursor)
trEMBLtr|G7L8T1|G7L8T1_MEDTR6.00E-133Acetolactate synthase, small subunit {ECO:0000313|EMBL:AET04421.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0550047977033+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01653E2.2.1.6S, ilvH, ilvN EC:2.2.1.6 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Butanoate metabolismmap00650
C5-Branched dibasic acid metabolismmap00660
Valine, leucine and isoleucine biosynthesismap00290
Pantothenate and CoA biosynthesismap00770


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009082  branched-chain amino acid biosynthetic process


molecular_function

GO:0003984  acetolactate synthase activity

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005500s00044533.1PF13710.1ACT_52577.10E-13
Glyur005500s00044533.1PF10369.4ALS_ss_C671479.20E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.110
SRR1783600control9.679
SRR1783602moderate drought stress14.715
SRR1811619moderate drought stress13.864

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.054
DRR006520Root Summer glycyrrhizin high producing strain12.527
DRR006521Root Winter glycyrrhizin high producing strain8.001
DRR006522Root Winter glycyrrhizin high producing strain8.179
DRR006523Root Summer glycyrrhizin low producing strain13.837
DRR006524Root Summer glycyrrhizin low producing strain12.541
DRR006525Leaf Summer glycyrrhizin high producing strain10.940
DRR006526Leaf Summer glycyrrhizin high producing strain10.008

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.048
SRR2868004Drought Stress(Tissue:root)0.434
SRR2967015Control (Tissue:root)0.057

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.301
SRR9715740Leave0.174
SRR9715741Leave0.965
SRR9715739Root3.276
SRR9715742Root0.442
SRR9715743Root6.236

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.367
SRR8749028MeJA induced 9h0.928
SRR8749029MeJA induced 9h3.101
SRR8749030Uninduced2.525
SRR8749031Uninduced0.061
SRR8749032Uninduced4.761

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.588
SRR8400027Control-Root0.351

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved