Gene detail information of Glyur005525s00046106.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04070.1 | 3.00E-73 | NAC domain containing protein 47 |
| NR | XP_003548053.1 | 3.77E-159 | PREDICTED: NAC transcription factor NAM-2 [Glycine max] |
| Swissprot | tr|A2YMR0|NAC10_ORYSI | 2.00E-81 | NAC transcription factor ONAC010 |
| trEMBL | tr|B9U5I1|B9U5I1_SOYBN | 2.00E-158 | Transcriptional factor NAC11 {ECO:0000313|EMBL:ACC66315.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05525 | 22 | 2479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005525s00046106.1 | PF02365.10 | NAM | 9 | 145 | 2.60E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.174 |
| SRR1811619 | moderate drought stress | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.431 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.772 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.932 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.514 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.302 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.507 |
| SRR2967015 | Control (Tissue:root) | 0.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.541 |
| SRR9715740 | Leave | 5.277 |
| SRR9715741 | Leave | 7.342 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.346 |
| SRR9715743 | Root | 0.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.623 |
| SRR8749028 | MeJA induced 9h | 26.394 |
| SRR8749029 | MeJA induced 9h | 1.557 |
| SRR8749030 | Uninduced | 4.527 |
| SRR8749031 | Uninduced | 9.391 |
| SRR8749032 | Uninduced | 3.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.116 |
| SRR8400027 | Control-Root | 0.124 |