Gene detail information of Glyur005537s00042480.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07020.1 | 5.00E-45 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_006576628.1 | 2.40E-52 | PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like isoform X4 [Glycine max] |
| Swissprot | tr|Q9M8Z7|U80A2_ARATH | 2.00E-50 | Sterol 3-beta-glucosyltransferase UGT80A2 |
| trEMBL | tr|I1N1T4|I1N1T4_SOYBN | 8.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G28130.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05537 | 565 | 8510 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005537s00042480.1 | PF03033.15 | Glyco_transf_28 | 202 | 293 | 7.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.682 |
| SRR1783600 | control | 7.421 |
| SRR1783602 | moderate drought stress | 6.366 |
| SRR1811619 | moderate drought stress | 6.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.344 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.043 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.050 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.354 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.084 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.054 |
| SRR2967015 | Control (Tissue:root) | 0.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.209 |
| SRR9715740 | Leave | 0.403 |
| SRR9715741 | Leave | 0.047 |
| SRR9715739 | Root | 0.112 |
| SRR9715742 | Root | 0.104 |
| SRR9715743 | Root | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.111 |
| SRR8749028 | MeJA induced 9h | 2.291 |
| SRR8749029 | MeJA induced 9h | 1.250 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 1.457 |
| SRR8749032 | Uninduced | 1.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.354 |
| SRR8400027 | Control-Root | 0.113 |