Gene detail information of Glyur005537s00042481.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.10Leucine-rich repeat protein kinase family protein
NRXP_003619090.10CCP [Medicago truncatula]
COGYP_004775215.15.00E-48RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7KI99|G7KI99_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES75308.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0553727835922-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005537s00042481.1PF08263.7LRRNT_217547.70E-11
Glyur005537s00042481.1PF00560.28LRR_11321530.013
Glyur005537s00042481.1PF13516.1LRR_62983190.1
Glyur005537s00042481.1PF00560.28LRR_13553771
Glyur005537s00042481.1PF13855.1LRR_83804374.70E-09
Glyur005537s00042481.1PF00560.28LRR_14514720.11
Glyur005537s00042481.1PF13855.1LRR_85075671.80E-08
Glyur005537s00042481.1PF00069.20Pkinase6769087.50E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.461
SRR1783600control0.391
SRR1783602moderate drought stress1.049
SRR1811619moderate drought stress0.989

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.590
DRR006520Root Summer glycyrrhizin high producing strain0.614
DRR006521Root Winter glycyrrhizin high producing strain0.511
DRR006522Root Winter glycyrrhizin high producing strain0.546
DRR006523Root Summer glycyrrhizin low producing strain2.231
DRR006524Root Summer glycyrrhizin low producing strain1.976
DRR006525Leaf Summer glycyrrhizin high producing strain1.620
DRR006526Leaf Summer glycyrrhizin high producing strain1.339

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.144
SRR2868004Drought Stress(Tissue:root)2.488
SRR2967015Control (Tissue:root)2.230

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.979
SRR9715740Leave1.487
SRR9715741Leave1.296
SRR9715739Root0.125
SRR9715742Root0.878
SRR9715743Root0.841

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.136
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.361
SRR8400027Control-Root0.463

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved