Gene detail information of Glyur005593s00040493.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63440.10heavy metal atpase 5
NRXP_004507135.10PREDICTED: putative copper-transporting ATPase HMA5-like [Cicer arietinum]
COGYP_003495561.10heavy-metal transporting P-type ATPase [Deferribacter desulfuricans SSM1]
Swissprottr|Q9SH30|HMA5_ARATH0Probable copper-transporting ATPase HMA5
trEMBLtr|I1JM65|I1JM65_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G21650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0559315156930-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17686copA, ATP7 EC:3.6.3.54 MAPK signaling pathway - plant map04016
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006812  cation transport

GO:0030001  metal ion transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0019829  cation-transporting ATPase activity

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005593s00040493.1PF00403.21HMA1161752.20E-10
Glyur005593s00040493.1PF00122.15E1-E2_ATPase3926318.60E-50
Glyur005593s00040493.1PF00702.21Hydrolase6368621.80E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.012
SRR1783600control0.018
SRR1783602moderate drought stress0.025
SRR1811619moderate drought stress0.025

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.036
DRR006520Root Summer glycyrrhizin high producing strain0.036
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.037
DRR006524Root Summer glycyrrhizin low producing strain0.037
DRR006525Leaf Summer glycyrrhizin high producing strain0.031
DRR006526Leaf Summer glycyrrhizin high producing strain0.031

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.032
SRR2868004Drought Stress(Tissue:root)0.019
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.045
SRR9715740Leave0.000
SRR9715741Leave0.022
SRR9715739Root0.000
SRR9715742Root0.041
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.001
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.020
SRR8749030Uninduced0.021
SRR8749031Uninduced0.089
SRR8749032Uninduced0.204

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.027
SRR8400027Control-Root0.004

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved