Gene detail information of Glyur005689s00046703.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45550.16.00E-86cytochrome P450, family 76, subfamily C, polypeptide 4
NRBAE71205.10putative cytochrome P450 [Trifolium pratense]
COGYP_001865045.12.00E-28cytochrome P450 [Nostoc punctiforme PCC 73102]
Swissprottr|Q8VWZ7|C76B6_CATRO5.00E-131Geraniol 8-hydroxylase
trEMBLtr|Q2PEZ7|Q2PEZ7_TRIPR0Putative cytochrome P450 {ECO:0000313|EMBL:BAE71205.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0568963518049-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005689s00046703.1PF00067.17p450382656.10E-26
Glyur005689s00046703.1PF00067.17p4502734126.30E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.618
SRR1783600control0.513
SRR1783602moderate drought stress0.130
SRR1811619moderate drought stress0.300

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.668
DRR006520Root Summer glycyrrhizin high producing strain1.118
DRR006521Root Winter glycyrrhizin high producing strain0.089
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.222
DRR006524Root Summer glycyrrhizin low producing strain0.355
DRR006525Leaf Summer glycyrrhizin high producing strain46.006
DRR006526Leaf Summer glycyrrhizin high producing strain42.961

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.968
SRR2868004Drought Stress(Tissue:root)16.571
SRR2967015Control (Tissue:root)14.309

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave222.962
SRR9715740Leave106.600
SRR9715741Leave219.457
SRR9715739Root0.020
SRR9715742Root0.366
SRR9715743Root0.847

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.782
SRR8749028MeJA induced 9h0.570
SRR8749029MeJA induced 9h0.591
SRR8749030Uninduced1.399
SRR8749031Uninduced0.671
SRR8749032Uninduced1.114

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.364
SRR8400027Control-Root1.054

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved