Gene detail information of Glyur005703s00047631.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23240.1 | 2.00E-30 | ethylene response factor 1 |
| NR | XP_003537003.1 | 2.49E-76 | PREDICTED: ethylene-responsive transcription factor 1B-like [Glycine max] |
| Swissprot | tr|Q8LDC8|ERF92_ARATH | 1.00E-47 | Ethylene-responsive transcription factor 1B |
| trEMBL | tr|I1L8D5|I1L8D5_SOYBN | 9.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G04210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05703 | 6546 | 7358 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005703s00047631.1 | PF00847.15 | AP2 | 122 | 171 | 1.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.135 |
| SRR1783600 | control | 0.114 |
| SRR1783602 | moderate drought stress | 0.093 |
| SRR1811619 | moderate drought stress | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.624 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.430 |
| SRR2967015 | Control (Tissue:root) | 4.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 56.349 |
| SRR9715740 | Leave | 13.011 |
| SRR9715741 | Leave | 65.775 |
| SRR9715739 | Root | 0.095 |
| SRR9715742 | Root | 0.367 |
| SRR9715743 | Root | 0.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.519 |
| SRR8749028 | MeJA induced 9h | 13.661 |
| SRR8749029 | MeJA induced 9h | 5.277 |
| SRR8749030 | Uninduced | 9.273 |
| SRR8749031 | Uninduced | 26.268 |
| SRR8749032 | Uninduced | 14.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.613 |
| SRR8400027 | Control-Root | 5.700 |