Gene detail

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Gene detail information of Glyur005739s00046981.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G54380.1	1.00E-67	protein kinase family protein
NR	KEH19715.1	2.77E-129	receptor-like kinase, putative [Medicago truncatula]
COG	YP_004463009.1	2.00E-13	serine/threonine protein kinase with PASTA sensor(s) [Mahella australiensis 50-1 BON]
Swissprot	tr\|Q9LK35\|THE1_ARATH	2.00E-74	Receptor-like protein kinase THESEUS 1 (Precursor)
trEMBL	tr\|A0A072U1N9\|A0A072U1N9_MEDTR	1.00E-129	Receptor-like kinase, putative {ECO:0000313\|EMBL:KEH19715.1}

Sequence

Transcript Sequence

>Glyur005739s00046981.1
ATGGAAAATGGATCTCTCATCAGTCATCTTTATGGGAGAGACTTTGTTCCTCTTTCNTGGAAGCAACGCCTTGGGATATGCATTGGGGCTGCTAGGGGACTTTGTTATCTTCACACAGGAGCTAAGCAGAGCATNATTCATCGTGATGTGAAAACAGCGAACATTCTGTTGGATGGAAATCTTGTGCCAAAAGTTGCTGATTTTGGGATNTCAAAGAAGGGCCCTCTGCTGGATAAGAGCCACGTGACAACCAATGTAAAGGGTAGCTTCGGCTATGTTGATCCTGAGTATTTCAGAACNAAGTTTCTTACTAAGAAATCTGATGTTTACTCCTTTGGGGTGTTGTTGATTGAAGTTATATGTGGCAAGCCTGCTTTAGATNATGCCCGTCCAACGCAACAAATGAATTTGGCAATATGGGCATTAAGCTGCGATAAAGAGGGTACCTTCCATGAATTGGTGGACCCATATTTGATTGGCAGAGTGAATATGGATTCTCTGAACAAGGTTTCTAAGTTGGCTTGGAAGTGCTTGGAGGAAAGTCGAGTGAACAGACCACCAATGGGTGTGCCTTCAGAATTCTCCCTCGAAACAGTTTACCGGTTGAATGTGGGGGGTGAATCTCTCAGTGCTCAAAATGACACCCTTGGTAGGAGTTGGGAGAGTGATGAAACTTACTTCCAAAACACCAGCACTGCTATTAATATTTCAACAAACATTTCTGATATAAACCAGCCTGATTTTCTACCAATCACAGCACCTCCATTGGTTTATGCTACTGCCAAAGCCTTGGGAAGTGCTTCAGGGGGGTCCCTTTTAAGTTGGGAATTCCGCGTGAGCCCAAACTTTTTGTACTTTATTCGGATGCATTTCTGTGACATAATTACCAAGTCTCCTAATAACTCTATGGTACTGTATCTATTAATAAATGGACATATTTTTCTTACAAATCTTCAACTGTCAAGGTTTTCTGGTGACCTTGCTGAGCCATATTACAAGGACATTTTCTCCAATGCCTCAGGGGGGGAGACACTGACTATAAGTGTTGGTCCTGCTGCAATGTTTAGTACACGAAATGCAACCATGAACGGGTTGGAGATAATGAAAATAAGAAACAAAGTTGGTGGCTTGTATCGCTTTTCCTCCTCTATTGGCATAGTTCCTACAAAATCATCAGAAAGAAGTAGGAAATTCATTATAATAATTGGCTGCAGTGTCTGTGTTCTCACGTTTCTGGCATTTCTTGGACTATCCTTGAGTTACTTAAAATCTCGCAGGGTGAAGAAGAAATCAGCAGCCACTTCCAAATTTTTGAGACATTTTACCCTGCACGCGATCCAACAAGCAACCAATGGTTTTGATCCTAACCTGCTTATCGGAGAAGGAGGATTTGGCAAGGTGTATAAAGGAACACTGGAAAATGGAAAAACAGTTGCCATCAAAGTAGCAAATCCGGAATCCAGACAAGGCCTCAATGAATTCCATAACGAGATAGAACTGTTATCTGGACTTCGTCATCAAAACCTCGTCTCACTTAAAGGTTACTGTAGTGAGGCCTCAGAACTGATTCTG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold05739	22	2105	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur005739s00046981.1	PF00069.20	Pkinase	1	186	3.20E-25
Glyur005739s00046981.1	PF12819.2	Malectin_like	193	370	9.30E-27
Glyur005739s00046981.1	PF07714.12	Pkinase_Tyr	459	523	5.00E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.296
SRR1783600	control	0.280
SRR1783602	moderate drought stress	0.260
SRR1811619	moderate drought stress	0.263

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.205
DRR006520	Root Summer glycyrrhizin high producing strain	0.204
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.035
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.338
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.525

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.621
SRR2868004	Drought Stress(Tissue:root)	3.421
SRR2967015	Control (Tissue:root)	3.474

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	168.228
SRR9715740	Leave	116.300
SRR9715741	Leave	128.323
SRR9715739	Root	0.818
SRR9715742	Root	1.076
SRR9715743	Root	1.713

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.161
SRR8749028	MeJA induced 9h	4.705
SRR8749029	MeJA induced 9h	1.667
SRR8749030	Uninduced	10.062
SRR8749031	Uninduced	3.834
SRR8749032	Uninduced	3.657

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.475
SRR8400027	Control-Root	0.941