Gene detail information of Glyur005813s00043547.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11300.11.00E-125protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
NRKEH22677.10S-locus lectin kinase family protein [Medicago truncatula]
COGYP_001958461.12.00E-07hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9SXB4|Y1130_ARATH3.00E-154G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 (Precursor)
trEMBLtr|A0A072TZ10|A0A072TZ10_MEDTR0S-locus lectin kinase family protein {ECO:0000313|EMBL:KEH22677.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0581320774896-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005813s00043547.1PF00954.15S_locus_glycop511611.10E-29
Glyur005813s00043547.1PF08276.6PAN_21952549.30E-15
Glyur005813s00043547.1PF07714.12Pkinase_Tyr3093953.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.063
SRR1783600control0.098
SRR1783602moderate drought stress0.125
SRR1811619moderate drought stress0.204

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.052
DRR006522Root Winter glycyrrhizin high producing strain0.103
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.115
DRR006526Leaf Summer glycyrrhizin high producing strain0.127

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.354
SRR2868004Drought Stress(Tissue:root)0.699
SRR2967015Control (Tissue:root)0.360

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.598
SRR9715740Leave0.539
SRR9715741Leave1.195
SRR9715739Root0.032
SRR9715742Root0.335
SRR9715743Root0.246

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.104
SRR8749028MeJA induced 9h6.593
SRR8749029MeJA induced 9h4.117
SRR8749030Uninduced5.997
SRR8749031Uninduced10.533
SRR8749032Uninduced6.835

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.535
SRR8400027Control-Root0.839

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved