Gene detail information of Glyur005880s00042245.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29380.1 | 2.00E-09 | protein kinase family protein / WD-40 repeat family protein |
| NR | KEH27225.1 | 5.23E-79 | phosphoinositide 3-kinase regulatory subunit-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072UMY9|A0A072UMY9_MEDTR | 2.00E-79 | Phosphoinositide 3-kinase regulatory subunit-like protein {ECO:0000313|EMBL:KEH27225.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05880 | 6890 | 7537 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08333 | PIK3R4, VPS15 | EC:2.7.11.1 | Autophagy - animal | map04140 |
| Autophagy - yeast | map04138 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.229 |
| SRR1783600 | control | 10.436 |
| SRR1783602 | moderate drought stress | 2.122 |
| SRR1811619 | moderate drought stress | 1.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.173 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.746 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.158 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.108 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.945 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.644 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.142 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.808 |
| SRR2967015 | Control (Tissue:root) | 4.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.312 |
| SRR9715740 | Leave | 0.101 |
| SRR9715741 | Leave | 0.433 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 0.887 |
| SRR9715743 | Root | 0.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.139 |
| SRR8749028 | MeJA induced 9h | 0.570 |
| SRR8749029 | MeJA induced 9h | 0.163 |
| SRR8749030 | Uninduced | 0.124 |
| SRR8749031 | Uninduced | 0.085 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.072 |
| SRR8400027 | Control-Root | 18.830 |