Gene detail information of Glyur005983s00044572.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63160.13.00E-105BTB and TAZ domain protein 1
NRXP_004515848.10PREDICTED: BTB/POZ and TAZ domain-containing protein 2-like [Cicer arietinum]
Swissprottr|Q9FMK7|BT1_ARATH6.00E-132BTB/POZ and TAZ domain-containing protein 1
trEMBLtr|G7JMM8|G7JMM8_MEDTR0BTB/POZ and TAZ domain protein {ECO:0000313|EMBL:AES91088.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0598321926265+


Gene family

Gene familysubfamily
Transcription Factors FamilyTAZ
Ubiquitin FamilyBTB
Ubiquitin Family3-box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003712  transcription cofactor activity

GO:0004402  histone acetyltransferase activity

GO:0005515  protein binding

GO:0008270  zinc ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005983s00044572.1PF00651.26BTB191171.80E-13
Glyur005983s00044572.1PF02135.11zf-TAZ2012932.10E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control35.083
SRR1783600control35.325
SRR1783602moderate drought stress50.478
SRR1811619moderate drought stress50.015

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.748
DRR006520Root Summer glycyrrhizin high producing strain47.213
DRR006521Root Winter glycyrrhizin high producing strain1.734
DRR006522Root Winter glycyrrhizin high producing strain1.654
DRR006523Root Summer glycyrrhizin low producing strain68.871
DRR006524Root Summer glycyrrhizin low producing strain70.354
DRR006525Leaf Summer glycyrrhizin high producing strain15.888
DRR006526Leaf Summer glycyrrhizin high producing strain15.677

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.772
SRR2868004Drought Stress(Tissue:root)38.379
SRR2967015Control (Tissue:root)66.280

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.897
SRR9715740Leave20.147
SRR9715741Leave28.146
SRR9715739Root44.366
SRR9715742Root78.293
SRR9715743Root67.062

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.368
SRR8749028MeJA induced 9h40.924
SRR8749029MeJA induced 9h31.675
SRR8749030Uninduced34.384
SRR8749031Uninduced40.688
SRR8749032Uninduced33.506

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.743
SRR8400027Control-Root63.760

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved