Gene detail information of Glyur005995s00047574.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11590.13.00E-39Integrase-type DNA-binding superfamily protein
NRKHN04233.19.21E-85Dehydration-responsive element-binding protein 3 [Glycine soja]
Swissprottr|Q9LYD3|DREB3_ARATH3.00E-57Dehydration-responsive element-binding protein 3
trEMBLtr|K7KZ31|K7KZ31_SOYBN6.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02001.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0599546375383+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005995s00047574.1PF00847.15AP2581097.20E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.145
SRR1783600control29.458
SRR1783602moderate drought stress35.799
SRR1811619moderate drought stress35.691

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.424
DRR006520Root Summer glycyrrhizin high producing strain19.410
DRR006521Root Winter glycyrrhizin high producing strain0.598
DRR006522Root Winter glycyrrhizin high producing strain0.437
DRR006523Root Summer glycyrrhizin low producing strain1.304
DRR006524Root Summer glycyrrhizin low producing strain2.217
DRR006525Leaf Summer glycyrrhizin high producing strain4.308
DRR006526Leaf Summer glycyrrhizin high producing strain5.927

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.718
SRR2868004Drought Stress(Tissue:root)13.476
SRR2967015Control (Tissue:root)14.436

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.723
SRR9715740Leave0.935
SRR9715741Leave0.985
SRR9715739Root46.584
SRR9715742Root29.992
SRR9715743Root31.424

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.610
SRR8749028MeJA induced 9h0.976
SRR8749029MeJA induced 9h0.255
SRR8749030Uninduced0.075
SRR8749031Uninduced0.024
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.434
SRR8400027Control-Root43.338

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved