Gene detail information of Glyur006024s00045221.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01590.22.00E-86Galactose mutarotase-like superfamily protein
NRKHN18019.11.48E-144Putative glucose-6-phosphate 1-epimerase [Glycine soja]
COGYP_001022382.19.00E-37aldose 1-epimerase [Methylibium petroleiphilum PM1]
Swissprottr|Q40784|AAPC_CENCI2.00E-92Putative glucose-6-phosphate 1-epimerase
trEMBLtr|I1N6Z9|I1N6Z9_SOYBN7.00E-146Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G09050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0602421073635+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006024s00045221.1PF01263.15Aldose_epim61151.30E-18
Glyur006024s00045221.1PF01263.15Aldose_epim1172141.00E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.854
SRR1783600control3.980
SRR1783602moderate drought stress4.680
SRR1811619moderate drought stress4.534

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.181
DRR006520Root Summer glycyrrhizin high producing strain23.115
DRR006521Root Winter glycyrrhizin high producing strain15.109
DRR006522Root Winter glycyrrhizin high producing strain16.025
DRR006523Root Summer glycyrrhizin low producing strain34.870
DRR006524Root Summer glycyrrhizin low producing strain36.272
DRR006525Leaf Summer glycyrrhizin high producing strain0.188
DRR006526Leaf Summer glycyrrhizin high producing strain0.159

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.298
SRR2868004Drought Stress(Tissue:root)2.136
SRR2967015Control (Tissue:root)2.283

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.285
SRR9715740Leave0.387
SRR9715741Leave0.886
SRR9715739Root1.178
SRR9715742Root0.778
SRR9715743Root0.857

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.325
SRR8749028MeJA induced 9h0.337
SRR8749029MeJA induced 9h0.370
SRR8749030Uninduced0.781
SRR8749031Uninduced1.345
SRR8749032Uninduced0.457

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.020
SRR8400027Control-Root1.100

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved