Gene detail information of Glyur006110s00045033.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02580.1 | 6.00E-17 | cytochrome P450, family 71, subfamily B, polypeptide 9 |
| NR | XP_003610580.1 | 9.48E-43 | Cytochrome P450 [Medicago truncatula] |
| Swissprot | tr|A6YIH8|C7D55_HYOMU | 2.00E-36 | Premnaspirodiene oxygenase |
| trEMBL | tr|G7JMV4|G7JMV4_MEDTR | 4.00E-43 | Cytochrome P450 family 71 protein {ECO:0000313|EMBL:AES92777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06110 | 5900 | 6292 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B9 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006110s00045033.1 | PF00067.17 | p450 | 22 | 86 | 5.90E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.406 |
| SRR1783600 | control | 0.408 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.612 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.657 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.711 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.493 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.272 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 2.433 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 3.246 |
| SRR9715742 | Root | 1.812 |
| SRR9715743 | Root | 2.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.431 |
| SRR8400027 | Control-Root | 1.792 |