Gene detail information of Glyur006114s00045327.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48480.10receptor-like kinase 1
NRXP_003631134.10Atypical receptor-like kinase MARK [Medicago truncatula]
COGYP_004163702.11.00E-18hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|Q9LP77|Y1848_ARATH0Probable inactive receptor kinase At1g48480 (Precursor)
trEMBLtr|G7LE78|G7LE78_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AET05610.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0611414743924+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006114s00045327.1PF08263.7LRRNT_234672.10E-05
Glyur006114s00045327.1PF00069.20Pkinase3686294.20E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.985
SRR1783600control15.520
SRR1783602moderate drought stress12.828
SRR1811619moderate drought stress12.595

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.258
DRR006520Root Summer glycyrrhizin high producing strain13.261
DRR006521Root Winter glycyrrhizin high producing strain0.425
DRR006522Root Winter glycyrrhizin high producing strain0.450
DRR006523Root Summer glycyrrhizin low producing strain9.693
DRR006524Root Summer glycyrrhizin low producing strain9.991
DRR006525Leaf Summer glycyrrhizin high producing strain3.951
DRR006526Leaf Summer glycyrrhizin high producing strain4.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.220
SRR2868004Drought Stress(Tissue:root)38.020
SRR2967015Control (Tissue:root)43.286

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.208
SRR9715740Leave1.447
SRR9715741Leave1.578
SRR9715739Root21.224
SRR9715742Root11.409
SRR9715743Root13.312

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.808
SRR8749028MeJA induced 9h9.712
SRR8749029MeJA induced 9h9.938
SRR8749030Uninduced1.934
SRR8749031Uninduced0.483
SRR8749032Uninduced1.716

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.671
SRR8400027Control-Root29.207

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved