Gene detail information of Glyur006135s00046108.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57150.1 | 7.00E-57 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_006586714.1 | 9.01E-131 | PREDICTED: uncharacterized protein LOC100817978 isoform X1 [Glycine max] |
| Swissprot | tr|Q2HIV9|BH035_ARATH | 7.00E-79 | Transcription factor bHLH35 |
| trEMBL | tr|K7LC25|K7LC25_SOYBN | 3.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06770.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06135 | 2 | 1830 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006135s00046108.1 | PF00010.21 | HLH | 54 | 96 | 1.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.610 |
| SRR1783600 | control | 4.554 |
| SRR1783602 | moderate drought stress | 3.124 |
| SRR1811619 | moderate drought stress | 3.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.293 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.906 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.199 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 58.365 |
| SRR2868004 | Drought Stress(Tissue:root) | 73.143 |
| SRR2967015 | Control (Tissue:root) | 33.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 64.540 |
| SRR9715740 | Leave | 26.407 |
| SRR9715741 | Leave | 110.969 |
| SRR9715739 | Root | 6.219 |
| SRR9715742 | Root | 31.268 |
| SRR9715743 | Root | 26.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.073 |
| SRR8749028 | MeJA induced 9h | 0.066 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.581 |
| SRR8749031 | Uninduced | 0.876 |
| SRR8749032 | Uninduced | 1.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.472 |
| SRR8400027 | Control-Root | 21.424 |