Gene detail information of Glyur006273s00045926.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32300.10S-domain-2 5
NRXP_004501336.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like [Cicer arietinum]
COGYP_001958461.11.00E-23hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q8RWZ5|SD25_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (Precursor)
trEMBLtr|K7KTI3|K7KTI3_SOYBN0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0627313903870-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006273s00045926.1PF01453.19B_lectin881792.70E-21
Glyur006273s00045926.1PF00069.20Pkinase5057701.80E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.689
SRR1783600control2.731
SRR1783602moderate drought stress2.701
SRR1811619moderate drought stress2.622

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.965
DRR006520Root Summer glycyrrhizin high producing strain0.989
DRR006521Root Winter glycyrrhizin high producing strain2.135
DRR006522Root Winter glycyrrhizin high producing strain2.285
DRR006523Root Summer glycyrrhizin low producing strain2.337
DRR006524Root Summer glycyrrhizin low producing strain2.454
DRR006525Leaf Summer glycyrrhizin high producing strain1.250
DRR006526Leaf Summer glycyrrhizin high producing strain1.190

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.861
SRR2868004Drought Stress(Tissue:root)9.588
SRR2967015Control (Tissue:root)9.926

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.625
SRR9715740Leave3.472
SRR9715741Leave4.854
SRR9715739Root3.187
SRR9715742Root1.769
SRR9715743Root2.047

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.315
SRR8749028MeJA induced 9h2.171
SRR8749029MeJA induced 9h1.157
SRR8749030Uninduced3.713
SRR8749031Uninduced4.089
SRR8749032Uninduced4.085

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.157
SRR8400027Control-Root4.538

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved